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1

Bacteriorhodopsin: Structural Insights Revealed Using X-Ray Lasers and Synchrotron Radiation

Wickstrand, Cecilia, Nogly, Przemyslaw, Nango, Eriko, Iwata, So, Standfuss, Jörg, Neutze, Richard

Journal:

Annual Review of Biochemistry

Année:

2019

Langue:

english

Fichier:

PDF, 5.24 MB

english, 2019

2

Volume Control of Metal-Plating Deposition Using a Nanopipette Probe by Controlling Electric Charge

Ito, So, Keino, Takuya, Iwata, Futoshi

Journal:

Japanese Journal of Applied Physics

Année:

2010

Langue:

english

Fichier:

PDF, 224 KB

english, 2010

3

Structure of a water soluble fragment of the ‘Rieske’ iron–sulfur protein of the bovine heart mitochondrial cytochrome bc1 complex determined by MAD phasing at 1.5 å resolution

So Iwata, Monica Saynovits, Thomas A Link, Hartmut Michel

Journal:

Année:

1996

Langue:

english

Fichier:

PDF, 3.25 MB

english, 1996

4

Exercise Intolerance Due to Mutations in the Cytochrome b Gene of Mitochondrial DNA

Andreu, Antoni L., Hanna, Michael G., Reichmann, Heinz, Bruno, Claudio, Penn, Audrey S., Tanji, Kurenai, Pallotti, Francesco, Iwata, So, Bonilla, Eduardo, Lach, Boleslaw, Morgan-Hughes, John, Shanske,

Journal:

Boston Medical and Surgical Journal

Année:

1999

Langue:

english

Fichier:

PDF, 247 KB

english, 1999

5

Structural and Computational Analysis of the Quinone-binding Site of Complex II (Succinate-Ubiquinone Oxidoreductase)

Horsefield, Rob, Yankovskaya, Victoria, Sexton, Graham, Whittingham, William, Shiomi, Kazuro, Ōmura, Satoshi, Byrne, Bernadette, Cecchini, Gary, Iwata, So

Journal:

Journal of Biological Chemistry

Année:

2006

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2006

6

Clustering procedures for the optimal selection of data sets from multiple crystals in macromolecular crystallography

Foadi, James, Aller, Pierre, Alguel, Yilmaz, Cameron, Alex, Axford, Danny, Owen, Robin L., Armour, Wes, Waterman, David G., Iwata, So, Evans, Gwyndaf

Journal:

Acta Crystallographica Section D Biological Crystallography

Année:

2013

Langue:

english

Fichier:

PDF, 2.11 MB

english, 2013

7

An efficient screening method for purifying and crystallizing membrane proteins using modified clear-native PAGE

Suzuki, Nanao, Takamuku, Yuuki, Asakawa, Tomohiro, Inai, Makoto, Hino, Tomoya, Iwata, So, Kan, Toshiyuki, Murata, Takeshi

Journal:

Analytical Biochemistry

Année:

2018

Langue:

english

Fichier:

PDF, 4.08 MB

english, 2018

8

Structure and function of the cytochrome C oxidase from paracoccus denitrificans

Axel Harrenga, So Iwata, Christian Ostermeier, Harmut Michel

Journal:

Journal of Inorganic Biochemistry

Année:

1997

Langue:

english

Fichier:

PDF, 73 KB

english, 1997

9

Possible use of ultrasound estimated bladder weight in evaluating vesicoureteral reflux in children

Mitsuhiko Inaba, Osamu Ukimura, Akihiro Kawauchi, Tsuyoshi Iwata, Motohiro Kanazawa, So Ushijima, Atsushi Ochiai, Munekado Kojima, Tsuneharu Miki

Journal:

Ultrasound in Medicine & Biology

Année:

2001

Langue:

english

Fichier:

PDF, 99 KB

english, 2001

10

Affinity partitioning of a poly(histidine)-tagged integral membrane protein, cytochrome bo3 ubiquinol oxidase, in a detergent–polymer aqueous two-phase system containing metal-chelating polymer

Ulf Sivars, Jeff Abramson, So Iwata, Folke Tjerneld

Journal:

Journal of Chromatography B: Biomedical Sciences and Applications

Année:

2000

Langue:

english

Fichier:

PDF, 366 KB

english, 2000

11

Possible contribution of prostatic anterior fibromuscular stroma to age-related urinary disturbance in reference to pressure-flow study

Osamu Ukimura, Tsuyoshi Iwata, So Ushijima, Kei Suzuki, Hisashi Honjo, Koji Okihara, Yoichi Mizutani, Akihiro Kawauchi, Tsuneharu Miki

Journal:

Ultrasound in Medicine & Biology

Année:

2004

Langue:

english

Fichier:

PDF, 339 KB

english, 2004

12

Use of Encapsulated Cells Secreting Murine TIMP-2 Ameliorates Collagen-Induced Arthritis in Mice

NICOLE RENGGLI-ZULLIGER, JEAN DUDLER, NOBORU FUJIMUTO, KAZUSHI IWATA, ALEXANDER SO

Journal:

Annals of the New York Academy of Sciences

Année:

1999

Langue:

english

Fichier:

PDF, 379 KB

english, 1999

13

Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans

Iwata, So, Ostermeier, Christian, Ludwig, Bernd, Michel, Hartmut

Journal:

Année:

1995

Fichier:

PDF, 3.11 MB

1995

14

10.1038/82824

Iwata, So, Wikström, Mårten, Abramson, Jeff, Riistama, Sirpa, Larsson, Gisela, Jasaitis, Audrius, Svensson-Ek, Margareta, Laakkonen, Liisa, Puustinen, Anne

Journal:

Natural Structural Biology

Année:

2000

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2000

15

10.1038/82829

Iwata, So, Wikström, Mårten, Abramson, Jeff, Riistama, Sirpa, Larsson, Gisela, Jasaitis, Audrius, Svensson-Ek, Margareta, Laakkonen, Liisa, Puustinen, Anne

Journal:

Nature Neuroscience

Année:

2001

Langue:

english

Fichier:

PDF, 30 KB

english, 2001

16

Crystal structure of A3B3 complex of V-ATPase from Thermus thermophilus

Maher, Megan J, Akimoto, Satoru, Iwata, Momi, Nagata, Koji, Hori, Yoshiko, Yoshida, Masasuke, Yokoyama, Shigeyuki, Iwata, So, Yokoyama, Ken

Journal:

The EMBO Journal

Année:

2009

Langue:

english

Fichier:

PDF, 1.12 MB

english, 2009

17

Overcoming barriers to membrane protein structure determination

Bill, Roslyn M, Henderson, Peter J F, Iwata, So, Kunji, Edmund R S, Michel, Hartmut, Neutze, Richard, Newstead, Simon, Poolman, Bert, Tate, Christopher G, Vogel, Horst

Journal:

Nature Biotechnology

Année:

2011

Langue:

english

Fichier:

PDF, 827 KB

english, 2011

18

GFP-based optimization scheme for the overexpression and purification of eukaryotic membrane proteins in Saccharomyces cerevisiae

Drew, David, Newstead, Simon, Sonoda, Yo, Kim, Hyun, von Heijne, Gunnar, Iwata, So

Journal:

Nature Protocols

Année:

2008

Langue:

english

Fichier:

PDF, 537 KB

english, 2008

19

T and R states in the crystals of bacterial L–lactate dehydrogenase reveal the mechanism for allosteric control

Iwata, So, Kamata, Kenji, Yoshida, Sumiko, Minowa, Takashi, Ohta, Takahisa

Journal:

Natural Structural Biology

Année:

1994

Fichier:

PDF, 1.54 MB

1994

20

Fv fragment-mediated crystallization of the membrane protein bacterial cytochrome c oxidase

Ostermeier, Christian, Iwata, So, Ludwig, Bernd, Michel, Hartmut

Journal:

Natural Structural Biology

Année:

1995

Fichier:

PDF, 925 KB

1995

21

Molecular mechanism of energy conservation in polysulfide respiration

Shimamura, Tatsuro, Curmi, Paul, Iwata, So, Jormakka, Mika, Yokoyama, Ken, Yano, Takahiro, Tamakoshi, Masatada, Akimoto, Satoru

Journal:

Nature Structural and Molecular Biology

Année:

2008

Langue:

english

Fichier:

PDF, 653 KB

english, 2008

22

Structural evidence for induced fit and a mechanism for sugar/H+ symport in LacY

Mirza, Osman, Guan, Lan, Verner, Gill, Iwata, So, Kaback, H Ronald

Journal:

The EMBO Journal

Année:

2006

Langue:

english

Fichier:

PDF, 460 KB

english, 2006

23

Structural evidence for induced fit and a mechanism for sugar/H+ symport in LacY

Mirza, Osman, Guan, Lan, Verner, Gill, Iwata, So, Kaback, H Ronald

Journal:

The EMBO Journal

Année:

2006

Langue:

english

Fichier:

PDF, 39 KB

english, 2006

24

Conformational Change of the Rieske [2Fe–2S] Protein inCytochromebc1Complex

Momi Iwata, Joakim Björkman, So Iwata

Journal:

Journal of Bioenergetics and Biomembranes

Année:

1999

Langue:

english

Fichier:

PDF, 130 KB

english, 1999

25

Rationalizing α-helical membrane protein crystallization

Simon Newstead, Sébastien Ferrandon, So Iwata

Journal:

Protein Science

Année:

2008

Langue:

english

Fichier:

PDF, 259 KB

english, 2008

26

Neuroselective Current Perception Threshold Evaluation of Bladder Mucosal Sensory Function

Osamu Ukimura, So Ushijima, Hisashi Honjo, Tsuyoshi Iwata, Kei Suzuki, Naoki Hirahara, Koji Okihara, Yoichi Mizutani, Akihiro Kawauchi, Tsuneharu Miki

Journal:

European Urology

Année:

2004

Langue:

english

Fichier:

PDF, 176 KB

english, 2004

27

Tricks of the trade used to accelerate high-resolution structure determination of membrane proteins

Yo Sonoda, Alex Cameron, Simon Newstead, Hiroshi Omote, Yoshinori Moriyama, Michihiro Kasahara, So Iwata, David Drew

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 748 KB

english, 2010

28

Structural comparison of lactose permease and the glycerol-3-phosphate antiporter: members of the major facilitator superfamily

Jeff Abramson, H Ronald Kaback, So Iwata

Journal:

Current Opinion in Structural Biology

Année:

2004

Langue:

english

Fichier:

PDF, 332 KB

english, 2004

29

Membranes: A new era in membrane protein studies

So Iwata, H Ronald Kaback

Journal:

Current Opinion in Structural Biology

Année:

2004

Langue:

english

Fichier:

PDF, 65 KB

english, 2004

30

Structure of photosystem II and molecular architecture of the oxygen-evolving centre

So Iwata, James Barber

Journal:

Current Opinion in Structural Biology

Année:

2004

Langue:

english

Fichier:

PDF, 467 KB

english, 2004

31

Overcoming the challenges of membrane protein crystallography

Elisabeth P Carpenter, Konstantinos Beis, Alexander D Cameron, So Iwata

Journal:

Current Opinion in Structural Biology

Année:

2008

Langue:

english

Fichier:

PDF, 235 KB

english, 2008

32

Architecture of NarGH Reveals a Structural Classification of Mo-bisMGD Enzymes

Mika Jormakka, David Richardson, Bernadette Byrne, So Iwata

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 708 KB

english, 2004

33

Crystal Structure of the Native Chaperonin Complex from Thermus thermophilus Revealed Unexpected Asymmetry at the cis-Cavity

Tatsuro Shimamura, Ayumi Koike-Takeshita, Ken Yokoyama, Ryoji Masui, Noriyuki Murai, Masasuke Yoshida, Hideki Taguchi, So Iwata

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 845 KB

english, 2004

34

Insights into How Nucleotide-Binding Domains Power ABC Transport

Simon Newstead, Philip W. Fowler, Paul Bilton, Elisabeth P. Carpenter, Peter J. Sadler, Dominic J. Campopiano, Mark S.P. Sansom, So Iwata

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2009

35

Benchmarking Membrane Protein Detergent Stability for Improving Throughput of High-Resolution X-ray Structures

Yo Sonoda, Simon Newstead, Nien-Jen Hu, Yilmaz Alguel, Emmanuel Nji, Konstantinos Beis, Shoko Yashiro, Chiara Lee, James Leung, Alexander D. Cameron, Bernadette Byrne, So Iwata, David Drew

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.44 MB

english, 2011

36

Analytical second derivatives in ab initio Hartree–Fock crystal orbital theory of polymers

So Hirata, Suehiro Iwata

Journal:

Journal of Molecular Structure: THEOCHEM

Année:

1998

Langue:

english

Fichier:

PDF, 168 KB

english, 1998

37

Structure of cytochrome c oxidase: a comparison of the bacterial and mitochondrial enzymes

Jeff Abramson, Margareta Svensson-Ek, Bernadette Byrne, So Iwata

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Année:

2001

Langue:

english

Fichier:

PDF, 683 KB

english, 2001

38

Membrane protein complexes

Bernadette Byrne, So Iwata

Journal:

Current Opinion in Structural Biology

Année:

2002

Langue:

english

Fichier:

PDF, 102 KB

english, 2002

39

Formate dehydrogenase – a versatile enzyme in changing environments

Mika Jormakka, Bernadette Byrne, So Iwata

Journal:

Current Opinion in Structural Biology

Année:

2003

Langue:

english

Fichier:

PDF, 383 KB

english, 2003

40

Immunoelectron Microscopy and Epitope Mapping with Monoclonal Antibodies Suggest the Existence of an Additional N-Terminal Transmembrane Helix in the Cytochrome b Subunit of Bacterial Ubiquinol: Cytochrome-c Oxidoreductases

Gerald Kleymann, So Iwata, Karl-Heinz Wiesmüller, Bernd Ludwig, Winfried Haase, Hartmut Michel

Journal:

Année:

1995

Langue:

english

Fichier:

PDF, 652 KB

english, 1995

41

Isolation, Characterisation and Crystallisation of a Water-Soluble Fragment of the Rieske Iron-Sulfur Protein of Bovine Heart Mitochondrial bc1 Complex

Thomas A. Link, Monica Saynovits, Claus Assmann, So Iwata, Tomoko Ohnishi, Gebhard Von Jagow

Journal:

Année:

1996

Langue:

english

Fichier:

PDF, 591 KB

english, 1996

42

Crystal Structure-Based Virtual Screening for Fragment-like Ligands of the Human Histamine H1 Receptor

Kooistra, Albert J., Vischer, Henry F., Katritch, Vsevolod, Kuijer, Martien, Shiroishi, Mitsunori, Iwata, So, Shimamura, Tatsuro, Stevens, Raymond C., de Esch, Iwan J. P., de Graaf, Chris

Journal:

Journal of Medicinal Chemistry

Année:

2011

Langue:

english

Fichier:

PDF, 4.26 MB

english, 2011

43

Molecular Basis of Allosteric Activation of Bacterial l-Lactate Dehydrogenase

So Iwata, Takahisa Ohta

Journal:

Journal of Molecular Biology

Année:

1993

Fichier:

PDF, 372 KB

1993

44

A Regular 1:1 Complex of Two Allosteric States in the Single Crystal of l-Lactate Dehydrogenase from Bifidobacterium longum

So Iwata, Sumiko Yoshida, Takahisa Ohta

Journal:

Journal of Molecular Biology

Année:

1994

Fichier:

PDF, 130 KB

1994

45

Channelling of dioxygen into the respiratory enzyme

Sirpa Riistama, Anne Puustinen, Arturo García-Horsman, So Iwata, Hartmut Michel, Mårten Wikström

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Année:

1996

Langue:

english

Fichier:

PDF, 374 KB

english, 1996

46

Functional implications of the structure of the ‘Rieske’ iron-sulfur protein of bovine heart mitochondrial cytochrome bc1 complex

Thomas A. Link, So Iwata

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Année:

1996

Langue:

english

Fichier:

PDF, 604 KB

english, 1996

47

Crystallization and preliminary X-ray investigation of proteinase A, a non-pepsin-type acid proteinase from Aspergillus niger var. macrosporus

Masaru Tanokura, Hidemi Matsuzaki, So Iwata, Atsushi Nakagawa, Toru Hamaya, Toshio Takizawa, Kenji Takahashi

Journal:

Journal of Molecular Biology

Année:

1992

Langue:

english

Fichier:

PDF, 275 KB

english, 1992

48

Fluorescence-based optimization of human bitter taste receptor expression in Saccharomyces cerevisiae

Taishi Sugawara, Keisuke Ito, Mitsunori Shiroishi, Natsuko Tokuda, Hidetsugu Asada, Takami Yurugi-Kobayashi, Tatsuro Shimamura, Takumi Misaka, Norimichi Nomura, Takeshi Murata, Keiko Abe, So Iwata, Ta

Journal:

Biochemical and Biophysical Research Communications

Année:

2009

Langue:

english

Fichier:

PDF, 404 KB

english, 2009

49

Reconstitution in vitro of the catalytic portion (NtpA3-B3-D-G complex) of Enterococcus hirae V-type Na+-ATPase

Satoshi Arai, Ichiro Yamato, Asuka Shiokawa, Shinya Saijo, Yoshimi Kakinuma, Yoshiko Ishizuka-Katsura, Mitsutoshi Toyama, Takaho Terada, Mikako Shirouzu, Shigeyuki Yokoyama, So Iwata, Takeshi Murata

Journal:

Biochemical and Biophysical Research Communications

Année:

2009

Langue:

english

Fichier:

PDF, 571 KB

english, 2009

50

Crystal Structure of Neoculin: Insights into its Sweetness and Taste-modifying Activity

Akiko Shimizu-Ibuka, Yuji Morita, Tohru Terada, Tomiko Asakura, Ken-ichiro Nakajima, So Iwata, Takumi Misaka, Hiroyuki Sorimachi, Soichi Arai, Keiko Abe

Journal:

Journal of Molecular Biology

Année:

2006

Langue:

english

Fichier:

PDF, 848 KB

english, 2006